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New posts in bioinformatics
Why Snakemake prefers calling script using script directive instead of calling from shell?
Dec 01, 2025
python
python-3.x
bioinformatics
snakemake
How to download pubmed articles and read them?
Nov 30, 2025
python-3.x
io
bioinformatics
biopython
Python program to generate a single species matrix file from multiple sample-wise species count files (using Pandas?)
Nov 29, 2025
python
pandas
numpy
csv
bioinformatics
Convert Bam File to CSV
Nov 26, 2025
r
csv
bioinformatics
printing specific characters that differ at same spot in two strings
Nov 25, 2025
python
bioinformatics
Pandas - idxmin on multiple columns with keeping all ties
Nov 24, 2025
python
python-3.x
pandas
bioinformatics
Appending filename at the end of certain lines in a text file
Nov 19, 2025
bash
sed
bioinformatics
fasta
Is there a way to convert a vcf.gz file directly into a vcf.bgz file?
Nov 20, 2025
gzip
bioinformatics
gunzip
vcf-variant-call-format
Generate the all possible unique peptides (permutants) in Python/Biopython
Nov 17, 2025
python
data-science
computer-science
bioinformatics
biopython
DESeq2 "NA values are not allowed" error when any(is.na(counts)) = FALSE
Nov 04, 2025
r
dataframe
bioinformatics
Heatmap.2: add row/column labels on left/top without hard coding coordinates
Oct 29, 2025
r
bioinformatics
heatmap
dna-sequence
Heatmap of a huge dataset
Oct 28, 2025
python
bioinformatics
heatmap
Biopython: is there a one-liner to extract the amino acid sequence of a specific chain from a PDB file?
Oct 26, 2025
python
bioinformatics
biopython
Saving the contents of a file generated inside process script into Nextflow variable
Oct 26, 2025
bash
groovy
bioinformatics
nextflow
Count number of matching bytes between two _m128i SIMD vectors
Oct 25, 2025
c++
bioinformatics
sse
simd
hamming-distance
Remove stop codon from file and replace it with NNN
Oct 24, 2025
perl
bioinformatics
Implementation of the majority merge algorithm for finding a super-sequence from sub-sequences?
Oct 24, 2025
javascript
algorithm
compression
bioinformatics
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